class2ids: Return body ids for large classes of neurons

In natverse/hemibrainr: Code for Working with Data from Janelia FlyEM's Hemibrain Project and the flywire data sets``

Return body ids for large classes of neurons

Description

Will use our Google sheet annotation spreadsheets or neuPrint queries as appropriate

Usage

class2ids(x, ..., unlist = TRUE, unique = TRUE, refresh = FALSE)

Arguments

x	A class of neuron (e.g. ORN, PN, DAN, MBON LHON, TOON, TOLN, HRN etc.)
...	Additional arguments passed to internal functions
unlist	return all the bodyids
unique	Whether to ensure that no duplicate ids are returned when unlist=TRUE.
refresh	Whether to refresh cached class information from remote sources. When FALSE (the default) this is automatically refreshed every hour.

Value

When unlist=FALSE a list with elements named by the elements of x (classes of neurons). When unlist=TRUE, a vector without names of all bodyids.

Examples

# NB these examples will not be run by default as they currently depend on
# access to some private Google sheets
## Not run: 
class2ids("uPN")
length(class2ids("ORN", possible = FALSE))
length(class2ids("ORN", possible = TRUE))

class2ids("DAN")
class2ids("MBON")

## End(Not run)

natverse/hemibrainr documentation built on Nov. 27, 2024, 9:01 p.m.