extract_cable: Extract axonic/dendritic points/cable from a...

In natverse/hemibrainr: Code for Working with Data from Janelia FlyEM's Hemibrain Project and the flywire data sets``

Extract axonic/dendritic points/cable from a neuron/neuronlist

Description

Extract axonic/dendritic/mixed/primary dendrite points/endpoints/cable from a neuron/neuronlist object

Usage

axonic_points(x, ...)

dendritic_points(x, ...)

mixed_points(x, ...)

primary_dendrite_points(x, ...)

primary_neurite_points(x, ...)

axonal_endings(x)

dendritic_endings(x)

axonic_endings(x)

primary_dendrite_endings(x)

primary_neurite_endings(x)

axonic_cable(x, mixed = FALSE, ...)

dendritic_cable(x, mixed = FALSE, ...)

arbour_cable(x, mixed = FALSE, ...)

unsure_cable(x, mixed = FALSE, ...)

primary_dendrite_cable(x, ...)

primary_neurite_cable(x, ...)

tract_cable(x, ...)

Arguments

x	a neuron/neuronlist object that has its axons/dendrites labelled in swc format in its neuron$d dataframes
...	additional arguments passed to methods
mixed	whether or not to include points assigned as uncertain or mixed polarity cable

Value

a matrix of 3D points

natverse/hemibrainr documentation built on Nov. 27, 2024, 9:01 p.m.