navinlabcode/CellTrek: Spatial Charting of Single Cell Transcriptomes in Tissues

CellTrek is a computational toolkit that can directly map single cells back to their spatial coordinates in tissue sections based on scRNA-seq and ST data. The CellTrek toolkit also provides two downstream analysis modules, including SColoc for spatial colocalization analysis and SCoexp for spatial co-expression analysis.

README.md

Vignettes Man pages API and functions Files

Package details
Maintainer
License	`use_mit_license()`, `use_gpl3_license()` or friends to pick a license
Version	0.0.94
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("navinlabcode/CellTrek")`