edge_odds: Title
In navinlabcode/CellTrek: Spatial Charting of Single Cell Transcriptomes in Tissues
edge_odds R Documentation
Title
Description
Title
Usage
edge_odds(el_inp, meta_data, col_cell = "cell_names")
Arguments
el_inp
Edge list of Delaunay triangulation network
meta_data
Meta data, must contain column of cell type
col_cell
Column name of cell type, cell type names must be syntactically valid
Value
A list of 1.Network-based cell co-occurrence; 2.Cell co-occurrence log odds ratio
Examples
test <- edge_odds(el_inp, meta_data, col_cell='cell_names')
navinlabcode/CellTrek documentation built on April 15, 2022, 8:04 a.m.
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| edge_odds | R Documentation |
Title
Description
Title
Usage
edge_odds(el_inp, meta_data, col_cell = "cell_names")
Arguments
el_inp |
Edge list of Delaunay triangulation network |
meta_data |
Meta data, must contain column of cell type |
col_cell |
Column name of cell type, cell type names must be syntactically valid |
Value
A list of 1.Network-based cell co-occurrence; 2.Cell co-occurrence log odds ratio
Examples
test <- edge_odds(el_inp, meta_data, col_cell='cell_names')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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