FindCorMarkers: Find highly correlated markers to target features
In navinlabcode/CellTrek: Spatial Charting of Single Cell Transcriptomes in Tissues
View source: R/FindCorMarkers.R
FindCorMarkers R Documentation
Find highly correlated markers to target features
Description
Find highly correlated markers to target features
Usage
FindCorMarkers(srt_inp, assay = "RNA", features, method = "spearman")
Arguments
srt_inp
Seurat input
features
Features that genes correlated with
method
Correlation method
Examples
CorMarkers <- FindCorMarkers(srt_inp=test_seurat, assay='RNA', features=c('k_dist', 'sig_score'), method='spearman')
navinlabcode/CellTrek documentation built on April 15, 2022, 8:04 a.m.
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View source: R/FindCorMarkers.R
| FindCorMarkers | R Documentation |
Find highly correlated markers to target features
Description
Find highly correlated markers to target features
Usage
FindCorMarkers(srt_inp, assay = "RNA", features, method = "spearman")
Arguments
srt_inp |
Seurat input |
features |
Features that genes correlated with |
method |
Correlation method |
Examples
CorMarkers <- FindCorMarkers(srt_inp=test_seurat, assay='RNA', features=c('k_dist', 'sig_score'), method='spearman')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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