BMfast2: Fast Brunner-Munzel tests (v2)

In neuroconductor-releases/LESYMAP: Lesion to Symptom Mapping in R

Description

Takes a binary matrix of voxels and a vector of behavior and runs Brunner-Munzel tests on each voxel. This is a fast function that corrects for infinite values with a similar approach as the nparcomp package.

Usage

BMfast2(X, y, computeDOF = TRUE)

Arguments

X	binary matrix of voxels (columns) for all subjects (rows)
y	vector of behavioral scores.
computeDOF	(true) chooses whether to compute degrees of freedom. Set to false to save time during permutations.

Value

List with two vectors:

• statistic - BM values

• dfbm - degrees of freedom

Author(s)

Dorian Pustina

Examples

set.seed(1234)
lesmat = matrix(rbinom(40,1,0.2), ncol=2)
set.seed(1234)
behavior = rnorm(20)
test = LESYMAP::BMfast2(lesmat, behavior)
test$statistic[,1] # -2.0571825 -0.8259754
test$dfbm[,1] # 16.927348  7.563432

neuroconductor-releases/LESYMAP documentation built on Nov. 13, 2020, 11:28 p.m.