run_prediction: Run LINDA Iteration Prediction
In neuroconductor/LINDA: Lesion Identification with Neighborhood Data Analysis

Description Usage Arguments Value

View source: R/run_prediction.R

Run LINDA Iteration Prediction

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run_prediction(img, brain_mask, template_brain, template_mask,
  typeofTransform = "SyN", lesion_mask, reflaxis = 0,
  voxel_resampling = c(2, 2, 2), sigma = 2, verbose = TRUE)

`img`	image of T1
`brain_mask`	image of brain mask
`template_brain`	image of template brain
`template_mask`	image of template brain mask
`typeofTransform`	type of transformation to perform
`lesion_mask`	image of lesion mask from previous iteration
`reflaxis`	Reflection axis
`voxel_resampling`	Resampling resolution of voxesl
`sigma`	Smoothing factor, passed to `asymmetry_mask` and `smoothImage`
`verbose`	Print diagnostic messages