CnT_H3K27ac_picard: Example Picard duplication metrics file 1
In neurogenomics/EpiCompare: Comparison, Benchmarking & QC of Epigenomic Datasets
CnT_H3K27ac_picard R Documentation
Example Picard duplication metrics file 1
Description
Duplication metrics output of CUT&Tag H3K27ac file
(sample accession: SRR8581604).
Raw sequences were aligned to hg19 genome and Picard
was performed by Leyla Abbasova.
The duplication summary output generated by Picard was processed
to reduce the size of data.
Usage
data("CnT_H3K27ac_picard")
Format
An object of class data.frame with 1 rows and 10 columns.
Source
The code to prepare the .Rda file is:
picard <- read.table("path/to/picard/duplication/output",
header = TRUE, fill = TRUE)]
CnT_H3K27ac_picard <- picard[1,]
usethis::use_data(CnT_H3K27ac_picard, overwrite = TRUE)
neurogenomics/EpiCompare documentation built on April 30, 2024, 3:58 p.m.
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| CnT_H3K27ac_picard | R Documentation |
Example Picard duplication metrics file 1
Description
Duplication metrics output of CUT&Tag H3K27ac file (sample accession: SRR8581604). Raw sequences were aligned to hg19 genome and Picard was performed by Leyla Abbasova. The duplication summary output generated by Picard was processed to reduce the size of data.
Usage
data("CnT_H3K27ac_picard")
Format
An object of class data.frame with 1 rows and 10 columns.
Source
The code to prepare the .Rda file is:
picard <- read.table("path/to/picard/duplication/output",
header = TRUE, fill = TRUE)]
CnT_H3K27ac_picard <- picard[1,]
usethis::use_data(CnT_H3K27ac_picard, overwrite = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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