import_bigwig_filtered: Import filtered bigwig
In neurogenomics/PeakyFinders: Mining, Calling, and Importing Epigenomic Peaks in R

import_bigwig_filtered

R Documentation

Import filtered bigwig

Import a subset of a bigwig file based on the coordinates in a GRanges object (gr.query_dat).

import_bigwig_filtered(bw.file, gr.query_dat, full_data = TRUE)

`bw.file`	Path to a bigwig file.
`gr.query_dat`	GRanges object to query the bigwig file with.
`full_data`	Whether to return the actual read ranges (`full_data=TRUE`), or just the "score" column which summarizes the height of the aggregated reads across the genome (`full_data=TRUE`).