fixDA: Direction AutoCorrelation

Description Usage Arguments Value Author(s) References Examples

View source: R/all_internal_v3.R

Description

This function is a part of the DiAutoCor function, which computes the angular persistence across several sequantial time intervals.

Usage

1
fixDA(Object, Step, sLAG, sPLOT, aPLOT, color, export, ExpName, new.fld)

Arguments

Step

A numeric value of the number of trajectory steps.

sLAG

A numeric value to be used to get the number of lags for the slope fitting. Default is 0.25, which represents 25 percent of the steps.

sPLOT

A logical vector that allows generating individual plots showing the angular persistence across several sequantial time intervals. Default is TRUE.

aPLOT

A logical vector that allows generating a plot showing the angular persistence across several sequantial time intervals of all cells. Default is TRUE.

color

A vector of colors that will be used for the plots

export

if 'TRUE' (default), exports function output

ExpName

String, name of the experiment

new.fld

path to the folder where to save files

object

CellMig class object, which is a list of data frames resulted from the PreProcessing.

Value

A data frame named "DA.ResultsTable".

Author(s)

Salim Ghannoum salim.ghannoum@medisin.uio.no

References

https://www.data-pulse.com/dev_site/cellmigration/

Examples

1
cellmigRation:::fixDA(1, 1, 1, 1, 1, 1, 1, 1, 1)

ocbe-uio/CellMigRation documentation built on Dec. 26, 2021, 10:19 p.m.