ComputeTracksStats: Compute Tracks Stats

Description Usage Arguments Value Author(s) References Examples

View source: R/all_functions_v8.R

Description

Wrapper for the MigrationStats() function. It computes statistics for a trackedCells object where cells have already been tracked.

Usage

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ComputeTracksStats(tc_obj, time_between_frames, resolution_pixel_per_micron)

Arguments

tc_obj

a trackedCells object

time_between_frames

integer, time interval between two successive frames were taken

resolution_pixel_per_micron

integer, image resolution, i.e. number of pixels per micron

Value

a trackedCells object, including cell track statistics

Author(s)

Damiano Fantini, damiano.fantini@gmail.com

References

https://www.data-pulse.com/dev_site/cellmigration/ https://www.mathworks.com/matlabcentral/fileexchange/60349-fasttracks

Examples

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x <- get(data(TrackCellsDataset))
x <- ComputeTracksStats(x, time_between_frames = 10,
                        resolution_pixel_per_micron = 20)
getCellsStats(x)

ocbe-uio/CellMigRation documentation built on Dec. 26, 2021, 10:19 p.m.