getAvailableAggrMetrics: Get Available Aggregate Cell Metrics

In ocbe-uio/CellMigRation: Track Cells, Analyze Cell Trajectories and Compute Migration Statistics

Description

Retrieve a list of metrics computed for an aggregated result object. This getter function takes the output of aggregateFR() as input.

Usage

getAvailableAggrMetrics(object)

Arguments

object

list of length 2, returned by the aggregateFR() function

Value

character vector listing all available metrics

Author(s)

Damiano Fantini and Salim Ghannoum [e-mail]

References

https://www.data-pulse.com/dev_site/cellmigration/

Examples

data(WSADataset)
wasDF1 <- WSADataset[seq(1,300,by=1), ]
wsaTD1 <- CellMig(wasDF1)
wsaTD1 <- wsaPreProcessing(wsaTD1,FrameN=65)
wsaTD1 <- FMI(wsaTD1,TimeInterval=10)
wsaTD1 <- FinRes(wsaTD1,ParCor=FALSE, export=FALSE)
wasDF2 <- WSADataset[seq(1001,1300,by=1), ]
wsaTD2 <- CellMig(wasDF2)
wsaTD2 <- wsaPreProcessing(wsaTD2,FrameN=65)
wsaTD2 <-FMI(wsaTD2,TimeInterval=10)
wsaTD2 <-FinRes(wsaTD2,ParCor=FALSE, export=FALSE)
AGG <- aggregateFR(wsaTD1 ,wsaTD2 ,export=FALSE)
getAvailableAggrMetrics(AGG)

ocbe-uio/CellMigRation documentation built on Dec. 26, 2021, 10:19 p.m.