Files in ococrook/bandle
An R package for the Bayesian analysis of differential subcellular localisation experiments
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/AllClasses.R
R/RcppExports.R
R/bandle-function.R
R/bandle-plots.R
R/bandle-sampler.R
R/bandle-sampling-utils.R
R/bandle-utils.R
R/fitGP.R
R/fitGPmaternPC.R
R/gradientGP.R
R/likelihoodGP.R
R/methods-bandle.R
R/metropolisGP.R
R/mr-method.R
R/simDynamic.R
R/zzz.R
README.md
inst/WORDLIST
inst/scripts/testing.R
man/bandle-EFDR.Rd
man/bandle-cpp.Rd
man/bandle-differentiallocalisation.Rd
man/bandle-gp.Rd
man/bandle-gpfit.Rd
man/bandle-internal.Rd
man/bandle-meanOrganelle.Rd
man/bandle-package.Rd
man/bandle-plots-convergence.Rd
man/bandle-plots-prob.Rd
man/bandle-plots-spatial.Rd
man/bandle-plots-translocations-table.Rd
man/bandle-plots-translocations.Rd
man/bandle-plots.Rd
man/bandle-predict.Rd
man/bandle-prior.Rd
man/bandle-process.Rd
man/bandle-sim.Rd
man/bandle.Rd
man/bandleParams.Rd
man/bandle_get_outliers.Rd
man/calculateGelman.Rd
man/gpParams.Rd
man/method-mr.Rd
man/plotOutliers.Rd
src/Bessel2ndKind.cpp
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/dmvtCpp.cpp
src/leapfrogGPcpp.cpp
src/pg_sample.cpp
src/utils.h
tests/spelling.R
tests/testthat.R
tests/testthat/test_bandleConsistency.R
tests/testthat/test_bandleOutput.R
tests/testthat/test_dlprob.R
tests/testthat/test_mr.R
tests/testthat/test_priorConsistency.R
tests/testthat/test_simdyn.R
vignettes/bandle.bib
vignettes/figs/traceplot.png
vignettes/v01-getting-started.Rmd
vignettes/v02-workflow.Rmd
