bandle-process: process bandle results

In ococrook/bandle: An R package for the Bayesian analysis of differential subcellular localisation experiments

process bandle results

Description

process bandle results

Usage

bandleProcess(params)

Arguments

params

An object of class bandleParams

Value

bandleProcess returns an instance of class bandleParams with its summary slot populated.

Examples

library(pRolocdata)
data("tan2009r1")
set.seed(1)
tansim <- sim_dynamic(object = tan2009r1, 
                    numRep = 6L,
                   numDyn = 100L)
gpParams <- lapply(tansim$lopitrep, function(x) 
fitGPmaternPC(x, hyppar = matrix(c(0.5, 1, 100), nrow = 1)))
d1 <- tansim$lopitrep
control1 <- d1[1:3]
treatment1 <- d1[4:6]
mcmc1 <- bandle(objectCond1 = control1, objectCond2 = treatment1, gpParams = gpParams,
                                     fcol = "markers", numIter = 5L, burnin = 1L, thin = 2L,
                                     numChains = 1, BPPARAM = SerialParam(RNGseed = 1))
mcmc1 <- bandleProcess(mcmc1)

ococrook/bandle documentation built on Nov. 4, 2024, 12:27 a.m.