advanced_search_by_contrasts: Accessory function allowing the advanced_search by...

Description Usage Arguments Value References

View source: R/Rcolombos.R

Description

Accessory function allowing the advanced_search by contrast_ids, go, experiment, condition

Usage

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advanced_search_by_contrasts(organism = NULL, ids = NULL,
  geneNames = FALSE, c_search_type = NULL)

Arguments

organism

A character containing the organism id: use listOrganisms to display the available organisms.

ids

A vector of strings representing contrast_id, go terms, experiment id or condition id according the search type.

geneNames

boolean if == FALSE (default) return the locustag otherwise the gene_name for the selected genes.

c_search_type

A string either contrast_names. experiment, go, condition.

Value

A data.frame containing locustag (gene_names), contrasts and M-values for the current organism and genes.

References

http://colombos.net


onertipaday/Rcolombos documentation built on May 23, 2017, 9:13 p.m.