getCompendium: This method allows to download/import the full compendium for...

Description Usage Arguments Value References Examples

View source: R/utilities.R

Description

This method allows to download/import the full compendium for the selected organism

Usage

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getCompendium(organism = "hpylo", path = NULL)

Arguments

organism

A character containing the organism id: use listOrganisms to display the available organisms.

path

A string indicating the path where the file will be either downloaded or read, if already retrieved

Value

A list containing three data.frame:

exprdata

the full compendium for the selected organism

condannot

The condition annotation for the selected organism

condontol

the condition ontology for the selected organism

References

http://colombos.net

Examples

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## Not run: 
library('Rcolombos')
hpylo <- getCompendium("hpylo")

## End(Not run)

onertipaday/Rcolombos documentation built on May 23, 2017, 9:13 p.m.