rSubmitter is a package that allows simple communication between R and a SLURM cluster to achieve three main tasks: 1. Easy submission, monitoring and management of individual cluster jobs. 2. Easy and fast submission of many jobs, by implementing SLURM arrays. 3. Seamlessly lapply (loop) parallelization.
Currently you can only install rSubmitter via the R devtools package:
library("devtools")
install_github("pablo-gar/rSubmitter")
Documention of the main rSubmitter
functions online:
Documention of the main rSubmitter
functions from R:
library("rSubmitter")
?Job
?JobArray
?superApply
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