pachterlab/SpatialFeatureExperiment: Integrating SpatialExperiment with Simple Features in sf
A new S4 class integrating Simple Features with the R package sf to bring geospatial data analysis methods based on vector data to spatial transcriptomics. Also implements management of spatial neighborhood graphs and geometric operations. This pakage builds upon SpatialExperiment and SingleCellExperiment, hence methods for these parent classes can still be used.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DataRepresentation Spatial Transcriptomics |
| Maintainer | |
| License | Artistic-2.0 |
| Version | 1.8.4 |
| URL | https://github.com/pachterlab/SpatialFeatureExperiment |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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