API for pachterlab/kma
KeepMeAround: Intron Retention Detection in RNA-Seq data
| Global functions | |
|---|---|
| add_gene_names | Source code |
| aggregate_filters | Source code |
| check_groupings | Man page Source code |
| filter_low_frags | Man page Source code |
| filter_low_tpm | Man page Source code |
| filter_perfect_psi | Man page Source code |
| getCol | Man page Source code |
| get_batch_intron_zc | Man page Source code |
| get_intron_zc | Man page Source code |
| intron_length | Man page Source code |
| intron_null_dist | Man page Source code |
| intron_pval | Source code |
| melt_intron_coords | Man page Source code |
| melt_retention | Source code |
| newIntronRetention | Man page Source code |
| print.IntronRetention | Man page Source code |
| read_express | Source code |
| retentionTestSingleCond | Source code |
| retention_test | Man page Source code |
| summarize_zero_coverage | Man page Source code |
