scores: Accessor Method for the 'scores' slot in a 'ChIPScore' object

scoresR Documentation

Accessor Method for the scores slot in a ChIPScore object

Description

Setter Method for the scores slot in a ChIPScore object

Usage

scores(object)

Arguments

object

object is ChIPScore object

Details

When using the processingChIP, this functions will return a name list of normalised ChIP scores at loci of interest. This functions enalbles you to extract those scores from the ChIPScore object.

Value

Returns the value assigned to the scores slot in a ChIPScore object.

Author(s)

Patrick C. N. Martin <p.martin@essex.ac.uk>

References

Zabet NR, Adryan B (2015) Estimating binding properties of transcription factors from genome-wide binding profiles. Nucleic Acids Res., 43, 84–94.

Examples

# Loading data
data(ChIPanalyserData)

chip<-processingChIP(chip,top)
str(scores(chip))




patrickCNMartin/ChIPanalyser documentation built on Nov. 24, 2022, 12:02 a.m.