compute_effect_size: compute_effect_size
In patrickCNMartin/Vesalius: Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data
View source: R/territory_identity_and_markers.R
compute_effect_size R Documentation
compute_effect_size
Description
compute_effect_size
Usage
compute_effect_size(pval, seed, query)
Arguments
pval
pvalue for a given gene
seed
number of cells in seed
query
number of cells in query
Details
If pval is 0 we convert that to a very small number
pwr does not take 0 as input values.
DESeq might return NA pvals - just skip the effect size and
return NA
Value
efect size estimate for an unbalenced
power analysis.
importFrom pwr pwr.2p2n.test
patrickCNMartin/Vesalius documentation built on April 17, 2025, 11:31 p.m.
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View source: R/territory_identity_and_markers.R
| compute_effect_size | R Documentation |
compute_effect_size
Description
compute_effect_size
Usage
compute_effect_size(pval, seed, query)
Arguments
pval |
pvalue for a given gene |
seed |
number of cells in seed |
query |
number of cells in query |
Details
If pval is 0 we convert that to a very small number pwr does not take 0 as input values. DESeq might return NA pvals - just skip the effect size and return NA
Value
efect size estimate for an unbalenced power analysis. importFrom pwr pwr.2p2n.test
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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