proximity_test: Detects potententially contaminated samples based on plate...
In phac-nml/wade: Executes molecular typing on contig assemblies
View source: R/Proximity_Test.R
proximity_test R Documentation
Detects potententially contaminated samples based on plate proximity
December 21 2023, Shelley Peterson
Run labware_GONO_AMR first, then run this analysis to evaluate sample proximity
Description
Detects potententially contaminated samples based on plate proximity
December 21 2023, Shelley Peterson
Run labware_GONO_AMR first, then run this analysis to evaluate sample proximity
Usage
proximity_test(Org_id, curr_work_dir)
Arguments
Org_id
Organism to query: GAS, PNEUMO or GONO
curr_work_dir
Start up directory from pipeline project to locate system file structure
Value
A table frame containing the results of the query
phac-nml/wade documentation built on March 16, 2024, 8:32 a.m.
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View source: R/Proximity_Test.R
| proximity_test | R Documentation |
Detects potententially contaminated samples based on plate proximity December 21 2023, Shelley Peterson Run labware_GONO_AMR first, then run this analysis to evaluate sample proximity
Description
Detects potententially contaminated samples based on plate proximity December 21 2023, Shelley Peterson Run labware_GONO_AMR first, then run this analysis to evaluate sample proximity
Usage
proximity_test(Org_id, curr_work_dir)
Arguments
Org_id |
Organism to query: GAS, PNEUMO or GONO |
curr_work_dir |
Start up directory from pipeline project to locate system file structure |
Value
A table frame containing the results of the query
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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