phylo_to_patristic_matrix: Get a patristic matrix from a 'phylo' object.
In phylotastic/datelife: Scientific Data on Time of Lineage Divergence for Your Taxa
View source: R/datelife_internal.R
phylo_to_patristic_matrix R Documentation
Get a patristic matrix from a phylo object.
Description
Get a patristic matrix from a phylo object.
Usage
phylo_to_patristic_matrix(phy, test = TRUE, tol = 0.01, option = 2)
Arguments
phy
A phylo object.
test
Default to TRUE. Whether to test if phy has branch lengths and is ultrametric or not.
tol
branching time in reference above which secondary constraints will be applied to target
option
an integer (1 or 2; see details).
Value
A patristic matrix.
phylotastic/datelife documentation built on June 9, 2024, 6:50 p.m.
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View source: R/datelife_internal.R
| phylo_to_patristic_matrix | R Documentation |
Get a patristic matrix from a phylo object.
Description
Get a patristic matrix from a phylo object.
Usage
phylo_to_patristic_matrix(phy, test = TRUE, tol = 0.01, option = 2)
Arguments
phy |
A |
test |
Default to |
tol |
branching time in |
option |
an integer (1 or 2; see details). |
Value
A patristic matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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