sample_trees: Sample trees from a file containing multiple trees. Usually...

In phylotastic/datelife: Scientific Data on Time of Lineage Divergence for Your Taxa

Sample trees from a file containing multiple trees. Usually from a bayesian analysis output trees file.

Description

Sample trees from a file containing multiple trees. Usually from a bayesian analysis output trees file.

Usage

sample_trees(trees_file, trees_object = NULL, burnin = 0.25, size = 100)

Arguments

trees_file	A character vector indicating the name and directory of file with trees to sample.
trees_object	An R object containing a list of trees already read into R from a tree file from a bayesian analysis output.
burnin	A numeric vector indicating the burnin fraction. It should be a number between 0 and 1. Default to 0.25
size	A numeric vector indicating the number of samples to be generated.

Value

A multiPhylo object with a random sample of trees.

phylotastic/datelife documentation built on Jan. 17, 2024, 11:10 p.m.