comp.rho: rho calculation
In piquelab/QuASAR: Quantitative Allele Specific Analysis of Reads
Description
Usage
Arguments
Value
Description
given reference and alternate read counts, & an error estimate, return the
estimated alternate alle frequency
Usage
1
comp.rho(ref, alt, eps)
Arguments
ref
integer. reference allele count
alt
integer. alternate allele count
eps
float. error estimate in [0,1]
Value
rho float. elstimate of alternate allele frequency
piquelab/QuASAR documentation built on May 25, 2019, 7:14 a.m.
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Description Usage Arguments Value
Description
given reference and alternate read counts, & an error estimate, return the estimated alternate alle frequency
Usage
1 | comp.rho(ref, alt, eps)
|
Arguments
ref |
integer. reference allele count |
alt |
integer. alternate allele count |
eps |
float. error estimate in [0,1] |
Value
rho float. elstimate of alternate allele frequency
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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