logLikBetaBinomial2: log-likelihood of beta-binomial model for heterozygotes
In piquelab/QuASAR: Quantitative Allele Specific Analysis of Reads
Description
Usage
Arguments
Value
Description
returns the log likelihood of reference & alternate read count data
given rho, & dispersion.
Usage
1
logLikBetaBinomial2(logit.p, D, R, A)
Arguments
logit.p
logit(rho) value in [0, 1]
D
dispersion estimate
R
reference read count
A
alternate read count
Value
log likelihood
piquelab/QuASAR documentation built on May 25, 2019, 7:14 a.m.
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Description Usage Arguments Value
Description
returns the log likelihood of reference & alternate read count data given rho, & dispersion.
Usage
1 | logLikBetaBinomial2(logit.p, D, R, A)
|
Arguments
logit.p |
logit(rho) value in [0, 1] |
D |
dispersion estimate |
R |
reference read count |
A |
alternate read count |
Value
log likelihood
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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