sp_create: construct ggplot2 object for plotting
In pkimes/spliceclust: Visualization and Clustering of Spliced Components
Description
Usage
Arguments
Author(s)
View source: R/splicepcp-helpers.R
Description
construct ggplot2 object for plotting
Usage
1
sp_create(gr_e, gr_j, vals_e, vals_j, log_base, log_shift, n, p_e, p_j)
Arguments
gr_e
GenomicRanges for exons
gr_j
GenomicRanges for junctions
vals_e
matrix of exon coverages
vals_j
matrix of junction coverages
log_base
see splicegrahm documentation
log_shift
see splicegrahm documentation
n
number of samples in vals_e, vals_j
p_j
number of junctions in gr_j
Author(s)
Patrick Kimes
pkimes/spliceclust documentation built on Jan. 2, 2020, 4:44 a.m.
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Description Usage Arguments Author(s)
View source: R/splicepcp-helpers.R
Description
construct ggplot2 object for plotting
Usage
1 | sp_create(gr_e, gr_j, vals_e, vals_j, log_base, log_shift, n, p_e, p_j)
|
Arguments
gr_e |
|
gr_j |
|
vals_e |
matrix of exon coverages |
vals_j |
matrix of junction coverages |
log_base |
see |
log_shift |
see |
n |
number of samples in |
p_j |
number of junctions in |
Author(s)
Patrick Kimes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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