Files in prioritizr/prioritizr
Systematic Conservation Prioritization in R

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DESCRIPTION

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NAMESPACE

NEWS.md R/ConservationModifier-class.R R/ConservationProblem-class.R R/Constraint-class.R R/Decision-class.R R/Objective-class.R R/OptimizationProblem-class.R R/OptimizationProblem-methods.R R/Penalty-class.R R/Portfolio-class.R R/RcppExports.R R/Solver-class.R R/Target-class.R R/add_absolute_targets.R R/add_asym_connectivity_penalties.R R/add_binary_decisions.R R/add_boundary_penalties.R R/add_cbc_solver.R R/add_compile_solver.R R/add_connectivity_penalties.R R/add_contiguity_constraints.R R/add_cplex_solver.R R/add_cuts_portfolio.R R/add_default_solver.R R/add_extra_portfolio.R R/add_feature_contiguity_constraints.R R/add_feature_weights.R R/add_gap_portfolio.R R/add_gurobi_solver.R R/add_highs_solver.R R/add_linear_constraints.R R/add_linear_penalties.R R/add_locked_in_constraints.R R/add_locked_out_constraints.R R/add_loglinear_targets.R R/add_lpsymphony_solver.R R/add_mandatory_allocation_constraints.R R/add_manual_bounded_constraints.R R/add_manual_locked_constraints.R R/add_manual_targets.R R/add_max_cover_objective.R R/add_max_features_objective.R R/add_max_phylo_div_objective.R R/add_max_phylo_end_objective.R R/add_max_utility_objective.R R/add_min_largest_shortfall_objective.R R/add_min_set_objective.R R/add_min_shortfall_objective.R R/add_neighbor_constraints.R R/add_proportion_decisions.R R/add_relative_targets.R R/add_rsymphony_solver.R R/add_semicontinuous_decisions.R R/add_shuffle_portfolio.R R/add_top_portfolio.R R/adjacency_matrix.R R/all_binary.R R/all_columns_any_finite.R R/all_columns_inherit.R R/all_finite.R R/all_positive.R R/all_proportion.R R/any_nonNA.R R/any_nonzero.R R/as.R R/as_Matrix.R R/assertions.R R/assertions_class.R R/assertions_misc.R R/assertions_raster.R R/assertions_sf.R R/assertions_vector.R R/binary_stack.R R/boundary_matrix.R R/branch_matrix.R R/category_layer.R R/category_vector.R R/cli.R R/compile.R R/connectivity_matrix.R R/constraints.R R/data.R R/decisions.R R/deprecated.R R/eval_asym_connectivity_summary.R R/eval_boundary_summary.R R/eval_connectivity_summary.R R/eval_cost_summary.R R/eval_feature_representation_summary.R R/eval_ferrier_importance.R R/eval_n_summary.R R/eval_rare_richness_importance.R R/eval_replacement_importance.R R/eval_target_coverage_summary.R R/external-classes.R R/fast_extract.R R/feature_abundances.R R/feature_names.R R/get_crs.R R/importance.R R/internal.R R/intersecting_units.R R/is_numeric_values.R R/is_same_crs.R R/is_spatial_extents_overlap.R R/knit_print.R R/list_text.R R/loglinear_interpolation.R R/marxan_boundary_data_to_matrix.R R/marxan_connectivity_data_to_matrix.R R/marxan_problem.R R/number_of_features.R R/number_of_planning_units.R R/number_of_total_units.R R/number_of_zones.R R/objectives.R R/optimization_problem.R R/package.R R/penalties.R R/planning_unit_solution_status.R R/portfolios.R R/presolve_check.R R/print.R R/problem-deprecated.R R/problem.R R/proximity_matrix.R R/reexports.R R/repr.R R/rescale_matrix.R R/rij_matrix.R R/run_calculations.R R/show.R R/simulate.R R/solve.R R/solvers.R R/st_geometry_classes.R R/summaries.R R/summary.R R/targets.R R/tbl_df.R R/test-helpers.R R/waiver.R R/write_problem.R R/zone_names.R R/zones.R R/zzz.R README.Rmd README.md

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src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/functions.cpp

src/functions.h

src/init.c

src/optimization_problem.cpp

src/optimization_problem.h

src/package.h

src/rcpp_absolute_amount_held_by_solution.cpp

src/rcpp_add_linear_constraints.cpp

src/rcpp_add_rij_data.cpp

src/rcpp_add_zones_constraints.cpp

src/rcpp_apply_asym_connectivity_penalties.cpp

src/rcpp_apply_boundary_penalties.cpp

src/rcpp_apply_bounded_constraints.cpp

src/rcpp_apply_connectivity_penalties.cpp

src/rcpp_apply_contiguity_constraints.cpp

src/rcpp_apply_decisions.cpp

src/rcpp_apply_feature_contiguity_constraints.cpp

src/rcpp_apply_feature_weights.cpp

src/rcpp_apply_linear_penalties.cpp

src/rcpp_apply_locked_constraints.cpp

src/rcpp_apply_max_cover_objective.cpp

src/rcpp_apply_max_features_objective.cpp

src/rcpp_apply_max_phylo_objective.cpp

src/rcpp_apply_max_utility_objective.cpp

src/rcpp_apply_min_largest_shortfall_objective.cpp

src/rcpp_apply_min_set_objective.cpp

src/rcpp_apply_min_shortfall_objective.cpp

src/rcpp_apply_neighbor_constraints.cpp

src/rcpp_asym_connectivity.cpp

src/rcpp_boundary.cpp

src/rcpp_branch_matrix.cpp

src/rcpp_connectivity.cpp

src/rcpp_ferrier_score.cpp

src/rcpp_ferrier_score.h

src/rcpp_forbid_solution.cpp

src/rcpp_list_to_matrix_indices.cpp

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vignettes/gurobi_installation_guide.Rmd vignettes/management_zones_tutorial.Rmd vignettes/package_overview.Rmd vignettes/prioritizr.Rmd vignettes/publication_record.Rmd

vignettes/reference-style.csl

vignettes/references.bib

vignettes/solver_benchmarks.Rmd

prioritizr/prioritizr documentation built on March 4, 2024, 3:54 p.m.

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