Files in prioritizr/prioritizrutils
Utilities for prioritizr

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
Makefile
NAMESPACE
NEWS.md R/ArrayParameter-proto.R R/Collection-proto.R R/ConservationModifier-proto.R R/ConservationProblem-proto.R R/Constraint-proto.R R/Decision-proto.R R/Id.R R/Objective-proto.R R/OptimizationProblem-methods.R R/OptimizationProblem-proto.R R/Parameter-proto.R R/Parameters-proto.R R/Penalty-proto.R R/RcppExports.R R/ScalarParameter-proto.R R/Solver-proto.R R/Target-proto.R R/add_boundary_penalties.R R/add_connected_constraints.R R/add_connectivity_penalties.R R/add_corridor_constraints.R R/add_feature_weights.R R/add_locked_in_constraints.R R/add_locked_out_constraints.R R/add_neighbor_contraints.R R/boundary_matrix.R R/branch_matrix.R R/compile.R R/connected_matrix.R R/connectivity_matrix.R R/constraints.R R/data.R R/decisions.R R/fast_extract.R R/internal.R R/intersecting_units.R R/magrittr-operators.R R/marxan_problem.R R/misc.R R/objectives.R R/package.R R/parallel.R R/parameters.R R/penalties.R R/pproto.R R/problem.R R/rij_matrix.R R/run_calculations.R R/simulate.R R/solve.R R/solvers.R R/targets.R R/waiver.R R/zzz.R README.md
_pkgdown.yml
appveyor.yml
cran-comments.md
data/sim_features.rda
data/sim_locked_in_raster.rda
data/sim_locked_out_raster.rda
data/sim_phylogeny.rda
data/sim_pu_lines.rda
data/sim_pu_points.rda
data/sim_pu_polygons.rda
data/sim_pu_raster.rda
docs/articles/README.Rmd
docs/articles/README.html
docs/articles/index.html
docs/articles/placeholder.html
docs/articles/prioritizrutils.html
docs/authors.html
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/reference/ArrayParameter-class.html
docs/reference/ArrayParameter.html
docs/reference/Collection-class.html
docs/reference/ConservationModifier-class.html
docs/reference/ConservationModifier.html
docs/reference/ConservationProblem-class.html
docs/reference/ConservationProblem.html
docs/reference/Constraint-class.html
docs/reference/Constraint.html
docs/reference/Constraints-class.html
docs/reference/Constraints.html
docs/reference/Decision-class.html
docs/reference/Decision.html
docs/reference/Objective-class.html
docs/reference/Objective.html
docs/reference/OptimizationProblem-class.html
docs/reference/OptimizationProblem-methods.html
docs/reference/OptimizationProblem.html
docs/reference/Parameter-class.html
docs/reference/Parameter.html
docs/reference/Parameters-class.html
docs/reference/Parameters.html
docs/reference/Penalty-class.html
docs/reference/ScalarParameter-class.html
docs/reference/ScalarParameter.html
docs/reference/Solver-class.html
docs/reference/Solver.html
docs/reference/Target-class.html
docs/reference/Target.html
docs/reference/add_boundary_constraint-7.png
docs/reference/add_boundary_constraint.html
docs/reference/add_boundary_penalties-4.png
docs/reference/add_boundary_penalties.html
docs/reference/add_connected_constraint.html
docs/reference/add_connected_constraints-4.png
docs/reference/add_connected_constraints.html
docs/reference/add_connectivity_penalties-5.png
docs/reference/add_connectivity_penalties.html
docs/reference/add_corridor_constraints-4.png
docs/reference/add_corridor_constraints.html
docs/reference/add_corridors_constraint.html
docs/reference/add_corridors_constraints.html
docs/reference/add_feature_weights-4.png
docs/reference/add_feature_weights.html
docs/reference/add_locked_in_constraint-14.png
docs/reference/add_locked_in_constraint.html
docs/reference/add_locked_in_constraints-12.png
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docs/reference/add_locked_in_constraints.html
docs/reference/add_locked_out_constraint-12.png
docs/reference/add_locked_out_constraint.html
docs/reference/add_locked_out_constraints-12.png
docs/reference/add_locked_out_constraints.html
docs/reference/add_neighbor_constraints-5.png
docs/reference/add_neighbor_constraints.html
docs/reference/array_parameters.html
docs/reference/as.html
docs/reference/boundary_matrix-2.png
docs/reference/boundary_matrix-4.png
docs/reference/boundary_matrix.html
docs/reference/branch_matrix-2.png
docs/reference/branch_matrix.html
docs/reference/compile.html
docs/reference/connected_matrix-2.png
docs/reference/connected_matrix.html
docs/reference/connectivity_matrix-2.png
docs/reference/connectivity_matrix-4.png
docs/reference/connectivity_matrix.html
docs/reference/constraints.html
docs/reference/decisions-4.png
docs/reference/decisions.html
docs/reference/distribute_load.html
docs/reference/fast_extract.html
docs/reference/index.html
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docs/reference/intersecting_units.html
docs/reference/is.html
docs/reference/is.parallel.html
docs/reference/marxan_problem-4.png
docs/reference/marxan_problem.html
docs/reference/new_id.html
docs/reference/new_optimization_problem.html
docs/reference/objectives-10.png
docs/reference/objectives-8.png
docs/reference/objectives.html
docs/reference/parallel.html
docs/reference/parameters.html
docs/reference/penalties.html
docs/reference/pipe.html
docs/reference/pproto.html
docs/reference/print.html
docs/reference/prioritizrutils.html
docs/reference/problem-5.png
docs/reference/problem.html
docs/reference/rij_matrix.html
docs/reference/run_calculations.html
docs/reference/scalar_parameters.html
docs/reference/show.html
docs/reference/sim_data-2.png
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docs/reference/simulate_cost.html
docs/reference/simulate_data.html
docs/reference/simulate_species.html
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docs/reference/targets-4.png
docs/reference/targets.html
docs/reference/tee.html
docs/reference/waiver.html
inst/doc/.gitkeep
inst/doc/prioritizrutils.R inst/doc/prioritizrutils.Rmd
inst/doc/prioritizrutils.html
inst/extdata/input.dat
inst/extdata/input/bound.dat
inst/extdata/input/pu.dat
inst/extdata/input/puvspr.dat
inst/extdata/input/spec.dat
inst/extdata/simulate_data.R inst/vign/README.Rmd inst/vign/placeholder.Rmd inst/vign/prioritizrutils.Rmd man/ArrayParameter-class.Rd man/Collection-class.Rd man/ConservationModifier-class.Rd man/ConservationProblem-class.Rd man/Constraint-class.Rd man/Decision-class.Rd man/Objective-class.Rd man/OptimizationProblem-class.Rd man/OptimizationProblem-methods.Rd man/Parameter-class.Rd man/Parameters-class.Rd man/Penalty-class.Rd man/ScalarParameter-class.Rd man/Solver-class.Rd man/Target-class.Rd man/add_boundary_penalties.Rd man/add_connected_constraints.Rd man/add_connectivity_penalties.Rd man/add_corridor_constraints.Rd man/add_feature_weights.Rd man/add_locked_in_constraints.Rd man/add_locked_out_constraints.Rd man/add_neighbor_constraints.Rd man/array_parameters.Rd man/as.Rd man/boundary_matrix.Rd man/branch_matrix.Rd man/compile.Rd man/connected_matrix.Rd man/connectivity_matrix.Rd man/constraints.Rd man/decisions.Rd man/distribute_load.Rd man/fast_extract.Rd man/intersecting_units.Rd man/is.Rd man/is.parallel.Rd man/marxan_problem.Rd man/new_id.Rd man/new_optimization_problem.Rd man/objectives.Rd man/parallel.Rd man/parameters.Rd man/penalties.Rd man/pipe.Rd man/pproto.Rd man/print.Rd man/prioritizrutils.Rd man/problem.Rd man/rij_matrix.Rd man/run_calculations.Rd man/scalar_parameters.Rd man/show.Rd man/sim_data.Rd man/simulate_cost.Rd man/simulate_data.Rd man/simulate_species.Rd man/solve.Rd man/solvers.Rd man/targets.Rd man/tee.Rd man/waiver.Rd
src/RcppExports.cpp
src/functions.cpp
src/functions.h
src/optimization_problem.cpp
src/optimization_problem.h
src/package.h
src/rcpp_add_rij_data.cpp
src/rcpp_apply_asymmetric_boundary_constraints.cpp
src/rcpp_apply_connected_constraints.cpp
src/rcpp_apply_corridor_constraints.cpp
src/rcpp_apply_decision.cpp
src/rcpp_apply_feature_weights.cpp
src/rcpp_apply_locked_in_constraints.cpp
src/rcpp_apply_locked_out_constraints.cpp
src/rcpp_apply_max_cover_objective.cpp
src/rcpp_apply_max_features_objective.cpp
src/rcpp_apply_max_phylo_objective.cpp
src/rcpp_apply_min_set_objective.cpp
src/rcpp_apply_neighbor_constraints.cpp
src/rcpp_apply_symmetric_boundary_constraints.cpp
src/rcpp_boundary_data.cpp
src/rcpp_boundary_data.h
src/rcpp_branch_matrix.cpp
src/rcpp_list_to_matrix_indices.cpp
src/rcpp_sp_to_polyset.cpp
tests/testthat.R tests/testthat/test_Id.R tests/testthat/test_OptimizationProblem.R tests/testthat/test_Waiver.R tests/testthat/test_add_boundary_penalties.R tests/testthat/test_add_connected_constraints.R tests/testthat/test_add_connectivity_penalties.R tests/testthat/test_add_corridor_constraints.R tests/testthat/test_add_locked_in_constraints.R tests/testthat/test_add_locked_out_constraints.R tests/testthat/test_add_max_cover_objective.R tests/testthat/test_add_max_features_objective.R tests/testthat/test_add_max_phylo_objective.R tests/testthat/test_add_min_set_objective.R tests/testthat/test_add_neighbor_constraints.R tests/testthat/test_boundary_matrix.R tests/testthat/test_branch_matrix.R tests/testthat/test_connected_matrix.R tests/testthat/test_connectivity_matrix.R tests/testthat/test_decisions.R tests/testthat/test_intersecting_units.R tests/testthat/test_marxan_problem.R tests/testthat/test_parallel.R tests/testthat/test_parameters.R tests/testthat/test_pproto.R tests/testthat/test_problem.R tests/testthat/test_rij_matrix.R tests/testthat/test_simulate.R tests/testthat/test_solvers.R tests/testthat/test_sp_to_polyset.R vignettes/prioritizrutils.Rmd
prioritizr/prioritizrutils documentation built on May 24, 2017, 11:21 a.m.