Files in prodakt/lncRna
Long Non-coding RNA Identification

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/10Fold_CrossValidation_modified.R R/BestTool.R R/BestTool.atleast.R R/BestTool.comb.R R/CodPot.R R/SumAtLeast.R R/SumCombTools.R R/SumSingleTools.R R/cisInter.R R/express.R R/helpFun.R R/prediction.R R/read_pfam.R R/read_rfam.R R/regGTF.R R/strGTF2stat.R R/stringtie2express.R R/test.train.cds.R R/test.train.nc.R R/trans.R README.md
img/ClockPlot.png
img/ConfusionMatrix.png
img/RadarPlot.png
img/SankeyPlot.png
img/SankeyType.png
img/lncRna_logo.png
img/lncRna_logo_small.png
img/vennFull.png
img/vennSel.png
img/venn_4.png
img/venn_all.png
lncRna.Rproj
man/BestTool.Rd man/BestTool.atleast.Rd man/BestTool.comb.Rd man/CPATcutoff.Rd man/CodPot2tbl.Rd man/ExpMeans.Rd man/ExpSums.Rd man/NotIn.Rd man/SumAtLeast.Rd man/SumCombTools.Rd man/SumSingleTools.Rd man/TransAct.Rd man/cisInter.Rd man/h.t.Rd man/prediction.Rd man/read.CNCI.Rd man/read.CPAT.Rd man/read.CPC2.Rd man/read.FEELnc.Rd man/read.LncFinder.Rd man/read.PLEK.Rd man/read.lncRNA_Mdeep.Rd man/read.pfam.Rd man/read.rfam.Rd man/refBiotypes.Rd man/strGTF2stat.Rd man/strtie2expr.Rd man/strtie2expr_units.Rd man/strtie2glen.Rd man/test.train.cds.Rd man/test.train.nc.Rd man/venn.CodPot.Rd
test/mouse/DEGs.csv
test/mouse/DELs.csv
test/mouse/cds_tt.rds
test/mouse/gene_count_matrix.csv
test/mouse/lncCodPot_MMus.rar
test/mouse/nc_tt.rds
test/mouse/pot_lncRNA.tab.tar.gz
test/mouse/readme.md
test/mouse/stringtie_merged.gtf.tar.gz
test/mouse/tab1.csv.tar.gz
test/mouse/transcript_count_matrix.csv
prodakt/lncRna documentation built on June 1, 2025, 1:05 p.m.