plotTicBasepeak: Total Ion Count and Base Peak Plot
In protViz/rawDiag: Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful
plotTicBasepeak R Documentation
Total Ion Count and Base Peak Plot
Description
displays the Total Ion Count (TIC) and the Base Peak Chromatogram
of a mass spectrometry measurement.
Multiple files are handled by faceting based on rawfile name.
Usage
plotTicBasepeak(x, method = "trellis")
Arguments
x
a data.frame object adhering to the specified criteria for
the is.rawDiag function.
method
specifying the plot method 'trellis' | 'violin' | 'overlay'.
The default is 'trellis'.
Value
a ggplot2 object for graphing the TIC and the Base Peak chromatogram.
Author(s)
Christian Trachsel (2017), Christian Panse (20231130) refactored
Examples
rawrr::sampleFilePath() |> readRaw() |> plotTicBasepeak()
protViz/rawDiag documentation built on May 4, 2024, 5:35 a.m.
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| plotTicBasepeak | R Documentation |
Total Ion Count and Base Peak Plot
Description
displays the Total Ion Count (TIC) and the Base Peak Chromatogram of a mass spectrometry measurement. Multiple files are handled by faceting based on rawfile name.
Usage
plotTicBasepeak(x, method = "trellis")
Arguments
x |
a |
method |
specifying the plot method 'trellis' | 'violin' | 'overlay'. The default is 'trellis'. |
Value
a ggplot2 object for graphing the TIC and the Base Peak chromatogram.
Author(s)
Christian Trachsel (2017), Christian Panse (20231130) refactored
Examples
rawrr::sampleFilePath() |> readRaw() |> plotTicBasepeak()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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