Man pages for pygmyperch/melfuR
A collection of ugly R functions for analysis of SNP and spatial data.
| DelphinusXY | Sample locations of common dolphins in Australia and New... |
| diversity_stats | This function calculates basic genetic diversity stats from a... |
| extract_tri | extract upper or lower triangle from a square matrix |
| HWE_filter | A wrapper function for the hw.test function from pegas to... |
| impute.data | impute missing genotypes based on pop structure characterised... |
| missing_data | This function calculates the percent of missing genotypes for... |
| percent_poly | This function calculates the percent polymorphic loci per... |
| rainbow.env | Environmental data for Melanotaenia fluviatilis sampling... |
| rainbow.genind | ddRAD data from Melanotaenia fluviatilis in the... |
| sf2KML | Generate KML Files from simple SF Geometry type: POINT... |
| subset_snps | This function subsets a structure file based on a list of... |
| viamaris | calculate pairwise oceanic distances among sampling locations |
| xy2kml | generate a kml file from dataframe of coordinates |
