diversity_stats: This function calculates basic genetic diversity stats from a...
In pygmyperch/melfuR: A collection of ugly R functions for analysis of SNP and spatial data.
View source: R/diversity_stats.R
diversity_stats R Documentation
This function calculates basic genetic diversity stats from a genind object
Description
This function calculates basic genetic diversity stats from a genind object
Usage
diversity_stats(genind)
Arguments
input.file
A genind object
Examples
## set directory for results to be written
setwd("path/to/working/directory")
## load the example data
data(rainbow.genind)
# calculate Na, %poly, Ho, He, and Fis (with 95%CIs) per population
res <- diversity_stats(rainbow.genind)
pygmyperch/melfuR documentation built on April 19, 2024, 7:24 a.m.
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View source: R/diversity_stats.R
| diversity_stats | R Documentation |
This function calculates basic genetic diversity stats from a genind object
Description
This function calculates basic genetic diversity stats from a genind object
Usage
diversity_stats(genind)
Arguments
input.file |
A genind object |
Examples
## set directory for results to be written
setwd("path/to/working/directory")
## load the example data
data(rainbow.genind)
# calculate Na, %poly, Ho, He, and Fis (with 95%CIs) per population
res <- diversity_stats(rainbow.genind)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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