alignPSMApexs: Align PSM apex retention times
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
alignPSMApexs R Documentation
Align PSM apex retention times
Description
Also nullify retention-time outliers.
Usage
alignPSMApexs(
dfs,
ms1full_files = NULL,
path_ms1 = NULL,
key = "pep_seq_modz",
temp_dir = NULL,
min_n = NULL
)
Arguments
dfs
A list of PSM tables by TMTSet[i]LCMSinj[j].
ms1full_files
A list of ms1full_ files.
path_ms1
The file path to ms1full_ files.
key
The key for data grouping.
temp_dir
A path for temporary files.
min_n
The minimum number of samples for RT alignments.
qzhang503/proteoQ documentation built on Feb. 27, 2025, 8:34 a.m.
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| alignPSMApexs | R Documentation |
Align PSM apex retention times
Description
Also nullify retention-time outliers.
Usage
alignPSMApexs(
dfs,
ms1full_files = NULL,
path_ms1 = NULL,
key = "pep_seq_modz",
temp_dir = NULL,
min_n = NULL
)
Arguments
dfs |
A list of PSM tables by TMTSet[i]LCMSinj[j]. |
ms1full_files |
A list of |
path_ms1 |
The file path to |
key |
The key for data grouping. |
temp_dir |
A path for temporary files. |
min_n |
The minimum number of samples for RT alignments. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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