In ravinpoudel/PhONA: PhONA provides a framework to select a testable and manageable number of OTUs/ASVs to support microbiome-based agriculture

  node edge nodeDegree avgpath trans   mod connectance wtc nModules.SA  top3hub      top3hubv
1   77  118      1.532   3.702 0.570 0.800       0.020  11          10 53;63;64 1;0.949;0.915
2   81  111      1.370   6.380 0.417 0.754       0.017  15          11 23;41;14  1;0.963;0.72
3   70  107      1.529   4.225 0.558 0.763       0.022  13          11 19;48;54 1;0.904;0.904
4   92  184      2.000   3.716 0.596 0.615       0.022  14          10  36;2;11 1;0.925;0.885
  n_postiveL n_negativeL  Treatment
1        111           5   Nongraft
2         97           9  Selfgraft
3         95           9 RST-04-106
4        148          32   Maxifort

ravinpoudel/PhONA documentation built on Jan. 30, 2023, 5:12 p.m.