RivPlot: River Plots

In rayanramin/RamPack: Ramin's Package

River Plots

Description

RivPlot is a wrapper for the modified plot_river2 function. the original plot_river is taken from the MutationalPatterns Package

Usage

RivPlot(
  input,
  fontsize = 4,
  is_ui = FALSE,
  is_norm = FALSE,
  title = "",
  AltCol = T,
  facet = NULL
)

Arguments

input	mutation count matrix from the get_mut_context_matrix() function
fontsize	font size of the text of the nucleotide/mutation labels
is_ui	are you plotting UI values or mutation count?
is_norm	is the data normalized?
title	Plot's title
AltCol	using alternative colors?
facet	a character vector to be used for facet labels

rayanramin/RamPack documentation built on Sept. 2, 2023, 1:20 a.m.