Lacertid.Original: Bauwens and Diaz-Uriarte (1997) lacertid data

In rdiaz02/PHYLOGR: Functions for Phylogenetically Based Statistical Analyses

Description

This is part of the data set used by Bauwens and Diaz-Uriarte (1997) in their analysis of lacertid life histories. The data include several life history traits of 18 lacertid species.

Format

This data frame contains the following columns:

Tips

the code for each species

svl

log 10 of mean adult female Snout-to-Vent length in mm

svl.matur

log 10 of SVL when sexual maturity (females) is reached

hatsvl

log 10 of hatchling svl in mm

hatweight

log10 of hatchling mass in grams

clutch.size

log10 of clutch size

age.mat

log10 of age at maturity in months

cl.freq

log10 of clutch frequency —number of clutches per year

Source

Bauwens, D., and Diaz-Uriarte, R. (1997) Covariation of life-history traits in lacertid lizards: a comparative study. The American Naturalist, 149, 91-11

See Also

Lacertid.varcov, Lacertid.IC

Examples

# a GLS fit
data(Lacertid.varcov)
data(Lacertid.Original)
ex.gls.phylog <-
phylog.gls.fit(Lacertid.Original$svl,Lacertid.Original$clutch.size,Lacertid.varcov)
ex.gls.phylog



## Not run: 
  # This data set can also be obtained from the pdi files
  # (see example in GarlandJanis.Original), or as:

LacertidSim <- read.sim.data(c("ifsmi.sim","ihshw.sim","iclag.sim","icfxx.sim"),
                  pdi.files=c("ifsmi.pdi","ihshw.pdi","iclag.pdi", "icfxx.pdi"),
		  variable.names = c("svl","svl.matur","hatsvl","hatweight",
		                    "clutch.size", "age.mat","cl.freq", "xx"))

LacertidSim <- LacertidSim[,-10]
LacertidOriginal <- LacertidSim[LacertidSim$sim.counter==0,-1]
  
## End(Not run)

rdiaz02/PHYLOGR documentation built on April 22, 2020, 11:41 p.m.