split_clustering: method implementation subclustering
In reactome/ReactomeGSA: Client for the Reactome Analysis Service for comparative multi-omics gene set analysis
View source: R/generate_pseudo_bulk_data.R
split_clustering R Documentation
method implementation subclustering
Description
method implementation subclustering
Usage
split_clustering(seurat_object, group_by, res, alg, cluster1, cluster2)
Arguments
seurat_object
The Seurat object to analyse.
group_by
entry in metadata table, based on these cluster annotation pseudo bulk is performed
res
The clustering resolution to use.
alg
Seurat subclustering algorithm id
cluster1
cluster to subcluster
cluster2
cluster to subcluster
Value
returns pseudo bulk generated data
reactome/ReactomeGSA documentation built on Nov. 9, 2024, 10:56 a.m.
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View source: R/generate_pseudo_bulk_data.R
| split_clustering | R Documentation |
method implementation subclustering
Description
method implementation subclustering
Usage
split_clustering(seurat_object, group_by, res, alg, cluster1, cluster2)
Arguments
seurat_object |
The Seurat object to analyse. |
group_by |
entry in metadata table, based on these cluster annotation pseudo bulk is performed |
res |
The clustering resolution to use. |
alg |
Seurat subclustering algorithm id |
cluster1 |
cluster to subcluster |
cluster2 |
cluster to subcluster |
Value
returns pseudo bulk generated data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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