split_subclustering_sce: split SCE Object with random pooling
In reactome/ReactomeGSA: Client for the Reactome Analysis Service for comparative multi-omics gene set analysis
View source: R/generate_pseudo_bulk_data.R
split_subclustering_sce R Documentation
split SCE Object with random pooling
Description
split SCE Object with random pooling
Usage
split_subclustering_sce(
sce_object,
group_by,
resolution,
subcluster_ref,
subcluster_comp
)
Arguments
sce_object
The SingleCellExperiment object to analyse.
group_by
entry in metadata table, based on these
cluster annotation pseudo bulk is performed
resolution
resolution
subcluster_ref
cluster to subcluster as areference
subcluster_comp
cluster to subcluster for comparison
Value
returns pseudo bulk generated data
reactome/ReactomeGSA documentation built on Nov. 9, 2024, 10:56 a.m.
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View source: R/generate_pseudo_bulk_data.R
| split_subclustering_sce | R Documentation |
split SCE Object with random pooling
Description
split SCE Object with random pooling
Usage
split_subclustering_sce(
sce_object,
group_by,
resolution,
subcluster_ref,
subcluster_comp
)
Arguments
sce_object |
The SingleCellExperiment object to analyse. |
group_by |
entry in metadata table, based on these cluster annotation pseudo bulk is performed |
resolution |
resolution |
subcluster_ref |
cluster to subcluster as areference |
subcluster_comp |
cluster to subcluster for comparison |
Value
returns pseudo bulk generated data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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