save_alignment_images | R Documentation |
Take a list of alignments, one per locus, and save a plot of each to a separate image file in a specified directory. If any of the per-locus alignment objects is NA it will be skipped. These are produced by summarize_dataset via align_alleles.
save_alignment_images(
alignments,
dp,
image.func = "png",
width = 1600,
height = 1200,
res = 150
)
alignments |
list of MSA alignment objects, such as created by summarize_dataset via align_alleles. The name of each alignment will be used for its filename. |
dp |
output directory path. |
image.func |
name of function to call for saving each image. |
width |
integer width of image. |
height |
integer height of image. |
res |
integer resolution of image in PPI. |
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