summarize_attribute: Create Summary Attribute Table

In ressy/microsat: Computational, High-throughput Individual Identification through Microsatellite Profiling

Create Summary Attribute Table

Description

Tabulate a single arbitrary attribute across loci, assuming repeats by two for the alleles. This is used for color-coding summary heatmaps (see plot_heatmap) on top of the attribute values, like Homozygous or ProminentSeqs.

Usage

summarize_attribute(results_summary, attrib, repeats = 2)

Arguments

results_summary	cross-sample summary data frame as produced by analyze_dataset.
attrib	name of column from results_summary to tabulate.
repeats	number of times to repeat each column, for matching with two alleles per entry.

Value

data frame of attribute across samples and loci.

ressy/microsat documentation built on Aug. 24, 2023, 10:09 a.m.