Files in rfctbio-bsu/ORFhunteR
Predict open reading frames in nucleotide sequences
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/annotateORFs.r
R/classifyORFsCandidates.R
R/codonStartStop.r
R/findORFs.r
R/findPTCs.r
R/getSeqORFs.r
R/loadTrExper.r
R/predictORFs.r
R/translateORFs.r
R/vectorizeORFs.R
README.md
inst/CITATION
inst/extdata/Set.trans_ORFs.coordinates.txt
inst/extdata/Set.trans_ORFs.sequences.fasta
inst/extdata/Set.trans_proteins.sequences.fasta
inst/extdata/Set.trans_sequences.fasta
inst/extdata/Set.trans_sequences.gtf
inst/extdata/cl_model.rds
inst/extdata/codon.table.txt
inst/images/fig_rm.jpg
license.txt
man/annotateORFs.Rd
man/classifyORFsCandidates.Rd
man/codonStartStop.Rd
man/findORFs.Rd
man/findPTCs.Rd
man/getSeqORFs.Rd
man/loadTrExper.Rd
man/predictORF.Rd
man/translateORFs.Rd
man/vectorizeORFs.Rd
src/RcppExports.cpp
src/getBaoMetrics.cpp
src/getCorrelationFactors.cpp
src/getPatternCount_V.cpp
vignettes/Figure_1.jpg
vignettes/Figure_2.jpg
vignettes/Figure_3.jpg
vignettes/ORFhunteR.Rmd
