get_all_b_or_t_cell_epitopes: Internal function

In richelbilderbeek/iedbr: Work With IEDB

Internal function

Description

Get all epitopes from a B or T cell assay

Usage

get_all_b_or_t_cell_epitopes(
  b_cell_or_t_cell,
  mhc_allele_names = "all",
  max_n_queries = Inf,
  verbose = FALSE
)

Arguments

b_cell_or_t_cell	use "b_cell" for B cells and "t_cell" for T cells
mhc_allele_names	names of one or more MHC allele names
max_n_queries	maximum number of queries. Use Inf to have no upper limit on this. Lower values are useful for debugging.
verbose	set to TRUE for more output

Value

all epitopes

Author(s)

Richèl J.C. Bilderbeek

Examples

if (pureseqtmr::is_on_ci()) {
  get_all_b_or_t_cell_epitopes(b_cell_or_t_cell = "b_cell")
  get_all_b_or_t_cell_epitopes(b_cell_or_t_cell = "t_cell")
}

richelbilderbeek/iedbr documentation built on Aug. 21, 2022, 12:12 a.m.