query_iedb | R Documentation |
Query the IEDB database.
query_iedb(query, table, max_n_queries = Inf, verbose = FALSE)
query |
an IEDB query,
as created by, for example, create_healthy_human_query.
Use check_query to check if the |
table |
a IEDB database table, as checked by check_table |
max_n_queries |
maximum number of queries. Use Inf to have no upper limit on this. Lower values are useful for debugging. |
verbose |
set to TRUE for more output |
a tibble with as much rows as hits.
The IEDB returns 10k hits per query. This means, to get the results of a query of more than 10k hits, the IEDB needs to be queried multiple times. query_iedb combines multiple calls to the IEDB, using query_iedb_with_offset.
Richèl J.C. Bilderbeek
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