calc_runif_phenotype_values: Calculate the phenotypic values for a trait that is random...
In richelbilderbeek/plinkr: Interface to PLINK
View source: R/calc_runif_phenotype_values.R
calc_runif_phenotype_values R Documentation
Calculate the phenotypic values for a trait that is random and uniform.
Description
Calculate the phenotypic values for a trait that is random and uniform,
as produced by runif.
Usage
calc_runif_phenotype_values(snvs)
Arguments
snvs
a tibble that contains the
two nucleotide calls for multiple individuals.
Each column is a haplotype, hence, for a diploid organism,
there are two columns.
Each individual is represented by a row.
Nucleotides are in uppercase.
Per SNV table, there can be only two different nucleotides,
as this is how a SNP works; a SNP from A to C is a different one (and
has a different SNP ID) than a SNP that encodes a mutation
for A to G.
Use create_snvs to create a snvs.
Author(s)
Richèl J.C. Bilderbeek
Examples
t <- tibble::tibble(
snv_1a = c("A", "A", "C", "C"),
snv_1b = c("A", "C", "A", "C")
)
calc_runif_phenotype_values(t)
richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.
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View source: R/calc_runif_phenotype_values.R
| calc_runif_phenotype_values | R Documentation |
Calculate the phenotypic values for a trait that is random and uniform.
Description
Calculate the phenotypic values for a trait that is random and uniform, as produced by runif.
Usage
calc_runif_phenotype_values(snvs)
Arguments
snvs |
a tibble that contains the
two nucleotide calls for multiple individuals.
Each column is a haplotype, hence, for a diploid organism,
there are two columns.
Each individual is represented by a row.
Nucleotides are in uppercase.
Per SNV table, there can be only two different nucleotides,
as this is how a SNP works; a SNP from A to C is a different one (and
has a different SNP ID) than a SNP that encodes a mutation
for A to G.
Use create_snvs to create a |
Author(s)
Richèl J.C. Bilderbeek
Examples
t <- tibble::tibble(
snv_1a = c("A", "A", "C", "C"),
snv_1b = c("A", "C", "A", "C")
)
calc_runif_phenotype_values(t)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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