check_cov_table: Check if a covariate table is valid.
In richelbilderbeek/plinkr: Interface to PLINK
View source: R/check_cov_table.R
check_cov_table R Documentation
Check if a covariate table is valid.
Description
Check if a covariate table is valid.
Will stop if not
Usage
check_cov_table(cov_table)
Arguments
cov_table
a table of covariates.
A cov_table is a tibble with these columns:
-
FID The family ID
-
IID Within-family ID (cannot be zero)
One or more columns of covariate values,
columns can have any name
These names match the PLINK column
names (https://www.cog-genomics.org/plink/1.9/input#pheno).
Use read_plink_cov_file to read a covariates file.
Use check_cov_table to test if a covariates table is valid.
Value
Nothing. Will stop if the cov_table is invalid
Author(s)
Richèl J.C. Bilderbeek
richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.
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View source: R/check_cov_table.R
| check_cov_table | R Documentation |
Check if a covariate table is valid.
Description
Check if a covariate table is valid. Will stop if not
Usage
check_cov_table(cov_table)
Arguments
cov_table |
a table of covariates. A
These names match the PLINK column names (https://www.cog-genomics.org/plink/1.9/input#pheno). Use read_plink_cov_file to read a covariates file. Use check_cov_table to test if a covariates table is valid. |
Value
Nothing. Will stop if the cov_table is invalid
Author(s)
Richèl J.C. Bilderbeek
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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