check_assoc_qt_data: Check if the 'assoc_qt_data' is valid

In richelbilderbeek/plinkr: Interface to PLINK

Check if the assoc_qt_data is valid

Description

Check if the assoc_qt_data is valid.

Usage

check_assoc_qt_data(assoc_qt_data)

Arguments

assoc_qt_data

data use to used by assoc_qt (as created by create_assoc_qt_data), which equals 'regular' data (see check_data) and a phenotype table/file

Details

assoc_qt_data is a list combined of:

• 'regular' data, as checked by check_data

• phenotype data, as checked by check_phenotype_data

Will stop if the assoc_qt_data is invalid

Value

nothing.

Author(s)

Richèl J.C. Bilderbeek

See Also

plinkr has the following functions to check if in-memory data is valid:

• PLINK text data: use check_plink_text_data

• PLINK binary data: use check_plink_bin_data

• PLINK2 binary data: use check_plink2_bin_data

• any PLINK/PLINK2 data: use check_data

• quantitative trait analysis data: use check_assoc_qt_data

richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.