check_calc_phenotype_function: Check if the 'calc_phenotype_function' is valid. Check if the...
In richelbilderbeek/plinkr: Interface to PLINK
View source: R/check_calc_phenotype_function.R
check_calc_phenotype_function R Documentation
Check if the calc_phenotype_function is valid.
Check if the calc_phenotype_function
is valid.
Description
Will stop if not
Usage
check_calc_phenotype_function(calc_phenotype_function)
Arguments
calc_phenotype_function
a function that calculate the phenotypes
from genotypes. The input is the genetic data as a tibble,
in which each row is an individual and the columns are the SNVs.
The first two columns are named snv_1a, snv_1b and
hold the genetic data for the first SNV of a diploid organism.
If there are more SNVs, columns continue with names,
snv_2a, snv_2b, snv_3a, snv_3b, etc.
Nucleotides are in uppercase.
The output must be the phenotypic values, as a numeric vector,
which has the same length as the number of individuals.
Use check_calc_phenotype_function
to check a calc_phenotype_function.
Value
Nothing. Will stop if the input
calc_phenotype_function is invalid
Author(s)
Richèl J.C. Bilderbeek
richelbilderbeek/plinkr documentation built on March 25, 2024, 3:18 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/check_calc_phenotype_function.R
| check_calc_phenotype_function | R Documentation |
Check if the calc_phenotype_function is valid.
Check if the calc_phenotype_function
is valid.
Description
Will stop if not
Usage
check_calc_phenotype_function(calc_phenotype_function)
Arguments
calc_phenotype_function |
a function that calculate the phenotypes
from genotypes. The input is the genetic data as a tibble,
in which each row is an individual and the columns are the SNVs.
The first two columns are named |
Value
Nothing. Will stop if the input
calc_phenotype_function is invalid
Author(s)
Richèl J.C. Bilderbeek
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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