create_params_set: Create the set of parameters to use, for each of the two...

In richelbilderbeek/raket: What If Speciation Takes Time?

Description

Create the set of parameters to use, for each of the two experiment types

Usage

  create_params_set(project_folder_name = file.path(peregrine::get_pff_tempdir(),
  "raket_werper"), experiment_type, mcmc_chain_length = 1111000,
  sequence_length = 15000, n_replicates = 1, max_n_params = Inf)

Arguments

project_folder_name	name of project folder
experiment_type	type of experiment, must a member of rkt_get_experiment_types
mcmc_chain_length	length of the MCMC chain, in number of states
sequence_length	a DNA sequence length, in base pairs
n_replicates	number of replicates per biological parameter set
max_n_params	the maximum number of parameters created. Set to a lower value in debugging

Value

a list of parameters

richelbilderbeek/raket documentation built on Dec. 31, 2019, 7:41 p.m.