importFeatureGroupsEnviMass: Imports feature groups from enviMass

In rickhelmus/patRoon: Workflows for Mass-Spectrometry Based Non-Target Analysis

Imports feature groups from enviMass

Description

Imports a 'profiles' produced by enviMass.

Usage

importFeatureGroupsEnviMass(path, feat, positive)

Arguments

path	The path of the enviMass project.
feat	The features object obtained with importFeaturesEnviMass.
positive	Whether data from positive (TRUE) or negative (FALSE) should be loaded.

Details

This function imports data from enviMass. This function is called when calling importFeatureGroups with type="envimass".

This function only imports 'raw' profiles, not any results from further componentization steps performed in enviMass. Furthermore, this functionality has only been tested with older versions of enviMass. Finally, please note that this function only supports features imported by importFeaturesEnviMass (obviously, the same project should be used for both importing functions).

Value

An object of a class which is derived from featureGroups.

The featuresSet method (for sets workflows) returns a featureGroupsSet object.

See Also

importFeatureGroups for more details and other algorithms.

rickhelmus/patRoon documentation built on Nov. 22, 2024, 3:11 p.m.